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1

High-quality, genome-wide SNP genotypic data for pedigreed germplasm of the diploid outbreeding species apple, peach, and sweet cherry through a common workflow

Vanderzande, Stijn, Howard, Nicholas P., Cai, Lichun, Da Silva Linge, Cassia, Antanaviciute, Laima, Bink, Marco C. A. M., Kruisselbrink, Johannes W., Bassil, Nahla, Gasic, Ksenija, Iezzoni, Amy, Van d

Journal:

Year:

2019

Language:

english

File:

PDF, 1.25 MB

english, 2019

2

Clarifying sub-genomic positions of QTLs for flowering habit and fruit quality in U.S. strawberry (Fragaria×ananassa) breeding populations using pedigree-based QTL analysis

Verma, Sujeet, Zurn, Jason D, Salinas, Natalia, Mathey, Megan M, Denoyes, Beatrice, Hancock, James F, Finn, Chad E, Bassil, Nahla V, Whitaker, Vance M

Journal:

Horticulture Research

Year:

2017

Language:

english

File:

PDF, 1.88 MB

english, 2017

3

Chloroplast sequence data differentiate Maleae, and specifically Pyrus, species in the USDA-ARS National Plant Germplasm System

Volk, Gayle M., Henk, Adam D., Richards, Christopher M., Bassil, Nahla, Postman, Joseph

Journal:

Genetic Resources and Crop Evolution

Year:

2018

Language:

english

File:

PDF, 680 KB

english, 2018

4

High-quality, genome-wide SNP genotypic data for pedigreed germplasm of the diploid outbreeding species apple, peach, and sweet cherry through a common workflow

Vanderzande, Stijn, Howard, Nicholas P., Cai, Lichun, Da Silva Linge, Cassia, Antanaviciute, Laima, Bink, Marco C. A. M., Kruisselbrink, Johannes W., Bassil, Nahla, Gasic, Ksenija, Iezzoni, Amy, Van d

Journal:

Year:

2019

File:

PDF, 1.25 MB

2019

5

Pseudo-chromosome–length genome assembly of a double haploid “Bartlett” pear (Pyrus communis L.)

Linsmith, Gareth, Rombauts, Stephane, Montanari, Sara, Deng, Cecilia H, Celton, Jean-Marc, Guérif, Philippe, Liu, Chang, Lohaus, Rolf, Zurn, Jason D, Cestaro, Alessandro, Bassil, Nahla V, Bakker, Lind

Journal:

Year:

2019

File:

PDF, 5.56 MB

2019

6

Generating Genomic Tools for Blueberry Improvement

Rowland, Lisa J., Bell, Daniel J., Alkharouf, Nadim, Bassil, Nahla V., Drummond, Francis A., Beers, Lee, Buck, Emily J., Finn, Chad E., Graham, Julie, McCallum, Susan, Hancock, James F., Polashock, Ja

Journal:

International Journal of Fruit Science

Year:

2012

Language:

english

File:

PDF, 358 KB

english, 2012

7

Development of a highly efficient Axiom™ 70 K SNP array for Pyrus and evaluation for high-density mapping and germplasm characterization

Montanari, Sara, Bianco, Luca, Allen, Brian J., Martínez-García, Pedro J., Bassil, Nahla V., Postman, Joseph, Knäbel, Mareike, Kitson, Biff, Deng, Cecilia H., Chagné, David, Crepeau, Marc W., Langley,

Journal:

Year:

2019

File:

PDF, 1.70 MB

2019

8

Reconstruction of the Largest Pedigree Network for Pear Cultivars and Evaluation of the Genetic Diversity of the USDA-ARS National Pyrus Collection

Montanari, Sara, Postman, Joseph, Bassil, Nahla V., Neale, David B.

Journal:

G3 Genes|Genome|Genetics

Year:

2020

File:

PDF, 1.02 MB

2020

9

A new SSR fingerprinting set and its comparison to existing SSR- and SNP-based genotyping platforms to manage Pyrus germplasm resources

Zurn, Jason D., Nyberg, April, Montanari, Sara, Postman, Joseph, Neale, David, Bassil, Nahla

Journal:

Tree Genetics & Genomes

Year:

2020

File:

PDF, 897 KB

2020

10

Nomenclature and genetic relationships of apples and pears from Terceira Island

Nahla Bassil, Kim E. Hummer, Joseph D. Postman, Gennaro Fazio, Angela Baldo, Isabel Armas, Roger Williams

Journal:

Genetic Resources and Crop Evolution

Year:

2009

Language:

english

File:

PDF, 378 KB

english, 2009

11

Identification of European and Asian pears using EST-SSRs fromPyrus

Nahla Bassil, Joseph D. Postman

Journal:

Genetic Resources and Crop Evolution

Year:

2010

Language:

english

File:

PDF, 338 KB

english, 2010

12

Genetic diversity of diploid Japanese strawberry species based on microsatellite markers

Wambui Njuguna, Kim E. Hummer, Christopher M. Richards, Thomas M. Davis, Nahla V. Bassil

Journal:

Genetic Resources and Crop Evolution

Year:

2011

Language:

english

File:

PDF, 1.70 MB

english, 2011

13

Progress in Blueberry Research in New Zealand

Buck, Emily J., Scalzo, Jessica, Wiedow, Claudia, Hurst, Roger, Allan, Andrew C., McGhie, Tony K., Bassil, Nahla V., Rowland, Lisa J.

Journal:

International Journal of Fruit Science

Year:

2012

Language:

english

File:

PDF, 231 KB

english, 2012

14

Insights into phylogeny, sex function and age of Fragaria based on whole chloroplast genome sequencing

Njuguna, Wambui, Liston, Aaron, Cronn, Richard, Ashman, Tia-Lynn, Bassil, Nahla

Journal:

Molecular Phylogenetics and Evolution

Year:

2013

Language:

english

File:

PDF, 1.57 MB

english, 2013

15

Development and preliminary evaluation of a 90 K Axiom® SNP array for the allo-octoploid cultivated strawberry Fragaria × ananassa

Bassil, Nahla V, Davis, Thomas M, Zhang, Hailong, Ficklin, Stephen, Mittmann, Mike, Webster, Teresa, Mahoney, Lise, Wood, David, Alperin, Elisabeth S, Rosyara, Umesh R, Koehorst-vanc Putten, Herma, Mo

Journal:

Year:

2015

Language:

english

File:

PDF, 3.74 MB

english, 2015

16

FaRXf1: a locus conferring resistance to angular leaf spot caused byXanthomonas fragariaein octoploid strawberry

Roach, Jack A., Verma, Sujeet, Peres, Natalia A., Jamieson, Andrew R., van de Weg, W. Eric, Bink, Marco C. A. M., Bassil, Nahla V., Lee, Seonghee, Whitaker, Vance M.

Journal:

Theoretical and Applied Genetics

Year:

2016

Language:

english

File:

PDF, 1.00 MB

english, 2016

17

Partial Purification of a cis-trans-Isomerase of Zeatin from Immature Seed of Phaseolus vulgaris L

Nahla V. Bassil, David W. S. Mok and Machteld C. Mok

Journal:

PLANT PHYSIOLOGY

Year:

1993

Language:

english

File:

PDF, 571 KB

english, 1993

18

Flowering Tendencies in Octoploid Strawberry Species

Hummer, Kim E., Oliphant, Jim M., Bassil, Nahla V.

Journal:

International Journal of Fruit Science

Year:

2016

Language:

english

File:

PDF, 7.64 MB

english, 2016

19

Genotype by environment interactions and combining ability for strawberry families grown in diverse environments

Mathey, Megan M., Mookerjee, Sonali, Mahoney, Lise L., Gündüz, Kazim, Rosyara, Umesh, Hancock, James F., Stewart, Philip J., Whitaker, Vance M., Bassil, Nahla V., Davis, Thomas M., Finn, Chad E.

Journal:

Year:

2017

Language:

english

File:

PDF, 386 KB

english, 2017

20

Perpetual Flowering in Strawberry Species

Cai, Weijian, Zurn, Jason D., Bassil, Nahla V., Hummer, Kim E.

Journal:

Year:

2017

Language:

english

File:

PDF, 562 KB

english, 2017

21

Public Availability of a Genotyped Segregating Population May Foster Marker Assisted Breeding (MAB) and Quantitative Trait Loci (QTL) Discovery: An Example Using Strawberry

Hancock, James F., Sooriyapathirana, Suneth S., Bassil, Nahla V., Stegmeir, Travis, Cai, Lichun, Finn, Chad E., Van de Weg, Eric, Weebadde, Cholani K.

Journal:

Frontiers in Plant Science

Year:

2016

Language:

english

File:

PDF, 177 KB

english, 2016

22

High-throughput marker assays for FaRPc2-mediated resistance to Phytophthora crown rot in octoploid strawberry

Noh, Young-Hee, Oh, Youngjae, Mangandi, Jozer, Verma, Sujeet, Zurn, Jason D., Lu, Yi-Tien, Fan, Zhen, Bassil, Nahla, Peres, Natalia, Cole, Glenn, Acharya, Charlotte, Famula, Randi, Knapp, Steve, Whita

Journal:

Molecular Breeding

Year:

2018

Language:

english

File:

PDF, 1.65 MB

english, 2018

23

Domestication of Temperate and Coastal Hybrids with Distinct Ancestral Gene Selection in Octoploid Strawberry

Hardigan, Michael A., Poorten, Thomas J., Acharya, Charlotte B., Cole, Glenn S., Hummer, Kim E., Bassil, Nahla, Edger, Patrick P., Knapp, Steven J.

Journal:

The Plant Genome

Year:

2018

Language:

english

File:

PDF, 3.28 MB

english, 2018

24

A High-Density Linkage Map of the Ancestral Diploid Strawberry, , Constructed with Single Nucleotide Polymorphism Markers from the IStraw90 Array and Genotyping by Sequencing

Mahoney, Lise L., Sargent, Daniel J., Abebe-Akele, F., Wood, Dave J., Ward, Judson A., Bassil, Nahla V., Hancock, James F., Folta, Kevin M., Davis, Thomas M.

Journal:

The Plant Genome

Year:

2016

Language:

english

File:

PDF, 2.39 MB

english, 2016

25

Validation of SNP markers for fruit quality and disease resistance loci in apple (Malus × domestica Borkh.) using the OpenArray® platform

Chagné, David, Vanderzande, Stijn, Kirk, Chris, Profitt, Natalie, Weskett, Rosemary, Gardiner, Susan E., Peace, Cameron P., Volz, Richard K., Bassil, Nahla V.

Journal:

Horticulture Research

Year:

2019

Language:

english

File:

PDF, 883 KB

english, 2019

26

Development of a highly efficient Axiom™ 70 K SNP array for Pyrus and evaluation for high-density mapping and germplasm characterization

Montanari, Sara, Bianco, Luca, Allen, Brian J., Martínez-García, Pedro J., Bassil, Nahla V., Postman, Joseph, Knäbel, Mareike, Kitson, Biff, Deng, Cecilia H., Chagné, David, Crepeau, Marc W., Langley,

Journal:

Year:

2019

Language:

english

File:

PDF, 1.70 MB

english, 2019

27

A roadmap for research in octoploid strawberry

Whitaker, Vance M., Knapp, Steven J., Hardigan, Michael A., Edger, Patrick P., Slovin, Janet P., Bassil, Nahla V., HytÃ¶nen, Timo, Mackenzie, Kathryn K., Lee, Seonghee, Jung, Sook, Main, Dorrie, Barbe

Journal:

Horticulture Research

Year:

2020

Language:

english

File:

PDF, 1.15 MB

english, 2020

28

Genetic Resistance to Fire Blight in Three Pear Populations

Zurn, Jason D., Norelli, John L., Montanari, Sara, Bell, Richard, Bassil, Nahla V.

Journal:

Year:

2020

File:

PDF, 1.20 MB

2020

29

QTL mapping of powdery mildew susceptibility in hop (Humulus lupulusL.)

John A. Henning, M. Shaun Townsend, David H. Gent, Nahla Bassil, Paul Matthews, Emily Buck, Ron Beatson

Journal:

Year:

2011

Language:

english

File:

PDF, 420 KB

english, 2011

30

Genic SSRs for European and North American hop (Humulus lupulusL.)

Nahla V. Bassil, B. Gilmore, J. M. Oliphant, K. E. Hummer, J. A. Henning

Journal:

Genetic Resources and Crop Evolution

Year:

2008

Language:

english

File:

PDF, 359 KB

english, 2008

31

Characterization of European hazelnut (Corylus avellana) cultivars using SSR markers

Tufan Gökirmak, Shawn A. Mehlenbacher, Nahla V. Bassil

Journal:

Genetic Resources and Crop Evolution

Year:

2009

Language:

english

File:

PDF, 413 KB

english, 2009

32

Genetic stability of cryopreserved shoot tips ofRubusgermplasm

Nina Rosa F. Castillo, Nahla V. Bassil, Sugae Wada, Barbara M. Reed

Journal:

In Vitro Cellular & Developmental Biology - Plant

Year:

2010

Language:

english

File:

PDF, 254 KB

english, 2010

33

EST-SSR markers from Fragaria vesca L. cv. Yellow Wonder

NAHLA V. BASSIL, WAMBUI NJUGUNA, JANET P. SLOVIN

Journal:

Molecular Ecology Resources

Year:

2006

Language:

english

File:

PDF, 84 KB

english, 2006

34

Meal Pattern of Male Rats Maintained on Histidine-, Leucine-, or Tyrosine-Supplemented Diet

Maya S. Bassil, Nahla Hwalla, Omar A. Obeid

Journal:

Year:

2007

Language:

english

File:

PDF, 73 KB

english, 2007

35

Nuclear and chloroplast microsatellite markers to assess genetic diversity and evolution in hazelnut species, hybrids and cultivars

Bassil, Nahla, Boccacci, Paolo, Botta, Roberto, Postman, Joseph, Mehlenbacher, Shawn

Journal:

Genetic Resources and Crop Evolution

Year:

2013

Language:

english

File:

PDF, 668 KB

english, 2013

36

Genetic diversity in wild and cultivated black raspberry (Rubus occidentalisL.) evaluated by simple sequence repeat markers

Dossett, Michael, Bassil, Nahla V., Lewers, Kim S., Finn, Chad E.

Journal:

Genetic Resources and Crop Evolution

Year:

2012

Language:

english

File:

PDF, 979 KB

english, 2012

37

Generation and analysis of blueberry transcriptome sequences from leaves, developing fruit, and flower buds from cold acclimation through deacclimation

Rowland, Lisa J, Alkharouf, Nadim, Darwish, Omar, Ogden, Elizabeth L, Polashock, James J, Bassil, Nahla V, Main, Dorrie

Journal:

BMC Plant Biology

Year:

2012

Language:

english

File:

PDF, 438 KB

english, 2012

38

Microsatellite Markers: Valuable in Vaccinium L.

Bassil, Nahla V.

Journal:

International Journal of Fruit Science

Year:

2012

Language:

english

File:

PDF, 121 KB

english, 2012

39

A genome-enabled, high-throughput, and multiplexed fingerprinting platform for strawberry (FragariaL.)

Chambers, Alan, Carle, Scott, Njuguna, Wambui, Chamala, Srikar, Bassil, Nahla, Whitaker, Vance M., Barbazuk, W. Brad, Folta, Kevin M.

Journal:

Molecular Breeding

Year:

2013

Language:

english

File:

PDF, 453 KB

english, 2013

40

Patterns of simple sequence repeats in cultivated blueberries (VacciniumsectionCyanococcusspp.) and their use in revealing genetic diversity and population structure

Bian, Yang, Ballington, James, Raja, Archana, Brouwer, Cory, Reid, Robert, Burke, Mark, Wang, Xinguo, Rowland, Lisa J., Bassil, Nahla, Brown, Allan

Journal:

Molecular Breeding

Year:

2014

Language:

english

File:

PDF, 1.07 MB

english, 2014

41

Developing Tools for Long-Term Breeding of Blueberry Germplasm for UK Production

McCallum, Susan, Woodhead, Mary, Jorgensen, Linzi, Gordon, Sandra, Brennan, Rex, Graham, Julie, Hackett, Christine A., Rowland, Lisa J., Hancock, James F., Olmstead, James W., Bassil, Nahla V.

Journal:

International Journal of Fruit Science

Year:

2012

Language:

english

File:

PDF, 112 KB

english, 2012

42

Construction of a genetic linkage map of an interspecific diploid blueberry population and identification of QTL for chilling requirement and cold hardiness

Rowland, Lisa J., Ogden, Elizabeth L., Bassil, Nahla, Buck, Emily J., McCallum, Susan, Graham, Julie, Brown, Allan, Wiedow, Claudia, Campbell, A. Malcolm, Haynes, Kathleen G., Vinyard, Bryan T.

Journal:

Molecular Breeding

Year:

2014

Language:

english

File:

PDF, 563 KB

english, 2014

43

Acute Effect of Leptin and Ghrelin Injection on Postprandial Glycogen and Lipid Synthesis in Rats

Bassil, Maya S., Mrayati, Maha M., Hwalla, Nahla C., Obeid, Omar A.

Journal:

Annals of Nutrition & Metabolism

Year:

2007

Language:

english

File:

PDF, 157 KB

english, 2007

44

Genetic stability of cryopreserved shoot tips of Rubus germplasm

Nina Rosa F. Castillo, Nahla V. Bassil, Sugae Wada and Barbara M. Reed

Journal:

In Vitro Cellular & Developmental Biology - Plant

Year:

2010

Language:

english

File:

PDF, 1.43 MB

english, 2010

45

Simple sequence repeat markers that identifyClavicepsspecies and strains

Gilmore, Barbara S., Alderman, Stephen C., Knaus, Brian J., Bassil, Nahla V., Martin, Ruth C., Dombrowski, James E., Dung, Jeremiah K. S.

Journal:

Fungal Biology and Biotechnology

Year:

2016

Language:

english

File:

PDF, 1.11 MB

english, 2016

46

Construction of a SNP and SSR linkage map in autotetraploid blueberry using genotyping by sequencing

McCallum, Susan, Graham, Julie, Jorgensen, Linzi, Rowland, Lisa J., Bassil, Nahla V., Hancock, James F., Wheeler, Edmund J., Vining, Kelly, Poland, Jesse A., Olmstead, James W., Buck, Emily, Wiedow, C

Journal:

Molecular Breeding

Year:

2016

Language:

english

File:

PDF, 852 KB

english, 2016

47

Validation of molecular markers associated with perpetual flowering in OctoploidFragariagermplasm

Salinas, Natalia R., Zurn, Jason D., Mathey, Megan, Mookerjee, Sonali, Denoyes, Beatrice, Perrotte, Justine, Potier, Aline, Finn, Chad E., Hancock, James F., Stewart, Philip, Bassil, Nahla V.

Journal:

Molecular Breeding

Year:

2017

Language:

english

File:

PDF, 1001 KB

english, 2017

48

Assessing genetic diversity of wild southeastern North American Vaccinium species using microsatellite markers

Bassil, Nahla, Bidani, Amira, Hummer, Kim, Rowland, Lisa J., Olmstead, Jim, Lyrene, Paul, Richards, Christopher

Journal:

Genetic Resources and Crop Evolution

Year:

2017

Language:

english

File:

PDF, 951 KB

english, 2017

49

Comparative genetic mapping reveals synteny and collinearity between the American cranberry and diploid blueberry genomes

Schlautman, Brandon, Diaz-Garcia, Luis, Covarrubias-Pazaran, Giovanny, Schlautman, Nathan, Vorsa, Nicholi, Polashock, James, Ogden, Elizabeth L., Brown, Allan, Lin, Ying-Chen, Bassil, Nahla, Buck, Emi

Journal:

Molecular Breeding

Year:

2018

Language:

english

File:

PDF, 1.67 MB

english, 2018

50

Chromosome-scale scaffolding of the black raspberry (Rubus occidentalis L.) genome based on chromatin interaction data

Jibran, Rubina, Dzierzon, Helge, Bassil, Nahla, Bushakra, Jill M., Edger, Patrick P., Sullivan, Shawn, Finn, Chad E., Dossett, Michael, Vining, Kelly J., VanBuren, Robert, Mockler, Todd C., Liachko, I

Journal:

Horticulture Research

Year:

2018

Language:

english

File:

PDF, 3.73 MB

english, 2018